Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm19640-201ENSMUST00000214849 464 ntBASIC12.61□□□□□ -0.39
Satb1Q60611 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.61□□□□□ -0.39
Satb1Q60611 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Satb1Q60611 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.61□□□□□ -0.39
Satb1Q60611 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Satb1Q60611 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Satb1Q60611 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Satb1Q60611 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.61□□□□□ -0.39
Satb1Q60611 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Satb1Q60611 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Satb1Q60611 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.6□□□□□ -0.39
Satb1Q60611 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm12948-201ENSMUST00000119406 682 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm24845-201ENSMUST00000158034 109 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Mir6998-201ENSMUST00000183343 64 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm38092-201ENSMUST00000195600 653 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Gm43778-201ENSMUST00000199438 199 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm8894-201ENSMUST00000074642 666 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm21811-201ENSMUST00000096485 930 ntBASIC12.6□□□□□ -0.39
Satb1Q60611 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Satb1Q60611 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Satb1Q60611 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Satb1Q60611 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Satb1Q60611 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.59□□□□□ -0.39
Satb1Q60611 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Gm12501-201ENSMUST00000119163 529 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 Gm14832-201ENSMUST00000121289 322 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.59□□□□□ -0.39
Satb1Q60611 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Gm19091-201ENSMUST00000208120 978 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 Ginm1-202ENSMUST00000065124 300 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Satb1Q60611 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.59□□□□□ -0.39
Satb1Q60611 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.59□□□□□ -0.39
Satb1Q60611 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Satb1Q60611 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms