Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm23596-201ENSMUST00000104304 132 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm12501-201ENSMUST00000119163 529 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm8343-201ENSMUST00000182705 994 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm19353-201ENSMUST00000184561 445 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm7467-201ENSMUST00000185173 652 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm43184-201ENSMUST00000197247 542 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm18711-201ENSMUST00000199341 750 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Ntng1-201ENSMUST00000051253 327 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.84□□□□□ -0.35
Shroom1Q5SX79 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shroom1Q5SX79 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shroom1Q5SX79 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm25881-201ENSMUST00000157783 103 ntBASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm3508-201ENSMUST00000186012 792 ntBASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.83□□□□□ -0.36
Shroom1Q5SX79 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Shroom1Q5SX79 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shroom1Q5SX79 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms