Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm807-202ENSMUST00000224929 408 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm5705-201ENSMUST00000066241 711 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 B9d1os-201ENSMUST00000137010 674 ntBASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm19208-201ENSMUST00000213861 912 ntBASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps54Q5SPW0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Mir5132-201ENSMUST00000175166 71 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm28686-201ENSMUST00000187404 609 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm5369-201ENSMUST00000217499 588 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps54Q5SPW0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vps54Q5SPW0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps54Q5SPW0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Vps54Q5SPW0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps54Q5SPW0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps54Q5SPW0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms