Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Rprl1-201ENSMUST00000158050 327 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm42693-201ENSMUST00000196779 631 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm30285-201ENSMUST00000214614 422 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm7399-201ENSMUST00000032395 858 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm12241-201ENSMUST00000118330 726 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm2991-201ENSMUST00000173338 480 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm27516-201ENSMUST00000184237 98 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm18711-201ENSMUST00000199341 750 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm6334-201ENSMUST00000207083 228 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.35□□□□□ -0.75
Trav5d-4Q5R1F6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav5d-4Q5R1F6 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms