Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx49Q4FZF3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx49Q4FZF3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Gm10731-201ENSMUST00000181171 448 ntBASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Mir8115-201ENSMUST00000184992 119 ntBASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Gm9797-202ENSMUST00000218003 294 ntBASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx49Q4FZF3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm11949-201ENSMUST00000117640 372 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm16071-201ENSMUST00000119589 793 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm13182-201ENSMUST00000122241 312 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm6485-201ENSMUST00000160676 439 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm17826-201ENSMUST00000189720 798 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm44329-201ENSMUST00000197469 112 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm44980-201ENSMUST00000205826 314 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm45575-201ENSMUST00000210283 548 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx49Q4FZF3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Mir1956-201ENSMUST00000157748 65 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm43520-201ENSMUST00000197996 164 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.06□□□□□ -0.16
Ddx49Q4FZF3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms