Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm10312-201ENSMUST00000078515 489 ntBASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Brf2Q3UAW9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm2991-201ENSMUST00000173338 480 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm27501-201ENSMUST00000183599 107 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm9368-201ENSMUST00000219348 831 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm7399-201ENSMUST00000032395 858 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.35□□□□□ -0.59
Brf2Q3UAW9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Brf2Q3UAW9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms