Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cul4aQ3TCH7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm5419-201ENSMUST00000119301 527 ntBASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cul4aQ3TCH7 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm43133-201ENSMUST00000197472 463 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm18893-201ENSMUST00000198416 943 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Gm8420-201ENSMUST00000097103 598 ntBASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cul4aQ3TCH7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms