Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm38301-201ENSMUST00000195573 543 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm18035-201ENSMUST00000211962 589 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm3150-201ENSMUST00000166418 204 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Tspy-ps-203ENSMUST00000186546 989 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm37009-201ENSMUST00000193297 361 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm3945-201ENSMUST00000196637 683 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm18164-201ENSMUST00000213769 927 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm18166-201ENSMUST00000215557 927 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Elobl-202ENSMUST00000082339 300 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm15373-201ENSMUST00000121495 214 ntBASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.73□□□□□ -0.69
Chd8Q09XV5 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm14113-201ENSMUST00000121399 976 ntBASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.73□□□□□ -0.69
Chd8Q09XV5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Chd8Q09XV5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Chd8Q09XV5 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm15033-201ENSMUST00000118188 673 ntBASIC10.72□□□□□ -0.69
Chd8Q09XV5 Gm16418-201ENSMUST00000118577 171 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms