Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col9a2Q07643 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm11663-201ENSMUST00000117888 290 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm9550-201ENSMUST00000161130 862 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm19459-201ENSMUST00000176240 835 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col9a2Q07643 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.05□□□□□ -0.32
Col9a2Q07643 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.05□□□□□ -0.32
Col9a2Q07643 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col9a2Q07643 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm8731-201ENSMUST00000118088 412 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm11667-201ENSMUST00000119828 486 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm16397-201ENSMUST00000122201 494 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm10774-201ENSMUST00000188689 204 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.04□□□□□ -0.32
Col9a2Q07643 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col9a2Q07643 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col9a2Q07643 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col9a2Q07643 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms