Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm14247-201ENSMUST00000120950 237 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.45□□□□□ -0.58
Cxcr5Q04683 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cxcr5Q04683 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm13875-201ENSMUST00000120162 282 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Rprl1-201ENSMUST00000158050 327 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm5706-201ENSMUST00000181525 993 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm28882-201ENSMUST00000185504 314 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.44□□□□□ -0.58
Cxcr5Q04683 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cxcr5Q04683 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cxcr5Q04683 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms