Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Msx3P70354 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Gm11989-201ENSMUST00000117240 672 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gm11362-201ENSMUST00000118838 850 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gm5419-201ENSMUST00000119301 527 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.38□□□□□ -0.43
Msx3P70354 Gm27501-201ENSMUST00000183599 107 ntBASIC12.38□□□□□ -0.43
Msx3P70354 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Gm9136-201ENSMUST00000193368 454 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gm31256-201ENSMUST00000194705 506 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Gm19187-201ENSMUST00000206781 892 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gm21769-201ENSMUST00000211922 111 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Gm9368-201ENSMUST00000219348 831 ntBASIC12.38□□□□□ -0.43
Msx3P70354 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Msx3P70354 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.38□□□□□ -0.43
Msx3P70354 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Msx3P70354 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Msx3P70354 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Msx3P70354 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Msx3P70354 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Msx3P70354 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Msx3P70354 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.37□□□□□ -0.43
Msx3P70354 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.37□□□□□ -0.43
Msx3P70354 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.37□□□□□ -0.43
Msx3P70354 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Msx3P70354 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.37□□□□□ -0.43
Msx3P70354 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.37□□□□□ -0.43
Msx3P70354 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msx3P70354 Gm14726-201ENSMUST00000120623 896 ntBASIC12.37□□□□□ -0.43
Msx3P70354 Gm7722-201ENSMUST00000120646 741 ntBASIC12.37□□□□□ -0.43
Msx3P70354 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms