Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lhx1P63006 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lhx1P63006 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 Gm2965-201ENSMUST00000198365 343 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 Gm4482-201ENSMUST00000200876 742 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lhx1P63006 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.84□□□□□ -0.51
Lhx1P63006 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lhx1P63006 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Lhx1P63006 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lhx1P63006 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lhx1P63006 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Lhx1P63006 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lhx1P63006 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lhx1P63006 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Lhx1P63006 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm24891-201ENSMUST00000104391 136 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm11509-201ENSMUST00000117358 325 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Gm15004-201ENSMUST00000119192 630 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.83□□□□□ -0.52
Lhx1P63006 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Lhx1P63006 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.83□□□□□ -0.52
Lhx1P63006 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm8100-201ENSMUST00000182906 988 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Gm43378-201ENSMUST00000199336 582 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm9797-202ENSMUST00000218003 294 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Lhx1P63006 Nsd1-205ENSMUST00000224693 852 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.83□□□□□ -0.52
Lhx1P63006 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Lhx1P63006 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Lhx1P63006 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lhx1P63006 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx1P63006 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.82□□□□□ -0.52
Lhx1P63006 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx1P63006 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.82□□□□□ -0.52
Lhx1P63006 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lhx1P63006 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.82□□□□□ -0.52
Lhx1P63006 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx1P63006 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx1P63006 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms