Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm18642-201ENSMUST00000206642 1400 ntBASIC16.17■□□□□ 0.18
Nphp4P59240 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Nphp4P59240 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 n-R5s84-201ENSMUST00000122591 109 ntBASIC16.17■□□□□ 0.18
Nphp4P59240 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm34023-201ENSMUST00000195539 217 ntBASIC16.17■□□□□ 0.18
Nphp4P59240 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC16.17■□□□□ 0.18
Nphp4P59240 CT573047.1-201ENSMUST00000223652 851 ntBASIC16.17■□□□□ 0.18
Nphp4P59240 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Nphp4P59240 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp4P59240 Gm43773-201ENSMUST00000198548 2162 ntBASIC16.17■□□□□ 0.18
Nphp4P59240 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nphp4P59240 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Nphp4P59240 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nphp4P59240 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm15615-201ENSMUST00000118876 198 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm8194-201ENSMUST00000159783 859 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Nphp4P59240 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm23105-201ENSMUST00000083719 134 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nphp4P59240 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Gm43242-201ENSMUST00000199507 1776 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp4P59240 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.16■□□□□ 0.18
Nphp4P59240 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.15■□□□□ 0.18
Nphp4P59240 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.15■□□□□ 0.18
Nphp4P59240 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.15■□□□□ 0.18
Nphp4P59240 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm15782-201ENSMUST00000121073 445 ntBASIC16.15■□□□□ 0.18
Nphp4P59240 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm38210-201ENSMUST00000191944 809 ntBASIC16.15■□□□□ 0.18
Nphp4P59240 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm2875-201ENSMUST00000211333 360 ntBASIC16.15■□□□□ 0.18
Nphp4P59240 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nphp4P59240 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC16.15■□□□□ 0.18
Nphp4P59240 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC16.15■□□□□ 0.18
Nphp4P59240 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC16.15■□□□□ 0.18
Nphp4P59240 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp4P59240 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms