Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.39□□□□□ -0.59
Nup43P59235 Gm38241-201ENSMUST00000192641 898 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Gm43962-201ENSMUST00000203898 190 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Gm17812-201ENSMUST00000204935 318 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Gm8913-201ENSMUST00000209491 641 ntBASIC11.39□□□□□ -0.59
Nup43P59235 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.39□□□□□ -0.59
Nup43P59235 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.39□□□□□ -0.59
Nup43P59235 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Nup43P59235 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.39□□□□□ -0.59
Nup43P59235 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Nup43P59235 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nup43P59235 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Nup43P59235 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Nup43P59235 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.38□□□□□ -0.59
Nup43P59235 Gm5419-201ENSMUST00000119301 527 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.38□□□□□ -0.59
Nup43P59235 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Gm5706-201ENSMUST00000181525 993 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.38□□□□□ -0.59
Nup43P59235 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Gm4607-201ENSMUST00000206649 577 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Gm5455-201ENSMUST00000058710 715 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.38□□□□□ -0.59
Nup43P59235 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nup43P59235 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nup43P59235 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nup43P59235 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.37□□□□□ -0.59
Nup43P59235 Gm27627-201ENSMUST00000183644 150 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm29615-201ENSMUST00000185371 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28224-201ENSMUST00000186078 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm29001-201ENSMUST00000186177 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28292-201ENSMUST00000186593 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28101-201ENSMUST00000187608 697 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms