Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CckbrP56481 Gm11989-201ENSMUST00000117240 672 ntBASIC11.2□□□□□ -0.62
CckbrP56481 Gm11362-201ENSMUST00000118838 850 ntBASIC11.2□□□□□ -0.62
CckbrP56481 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.2□□□□□ -0.62
CckbrP56481 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CckbrP56481 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.2□□□□□ -0.62
CckbrP56481 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CckbrP56481 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.2□□□□□ -0.62
CckbrP56481 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CckbrP56481 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
CckbrP56481 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Gm13296-201ENSMUST00000117854 997 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Gm14247-201ENSMUST00000120950 237 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.19□□□□□ -0.62
CckbrP56481 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.19□□□□□ -0.62
CckbrP56481 Gm17376-201ENSMUST00000166016 84 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CckbrP56481 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.19□□□□□ -0.62
CckbrP56481 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.19□□□□□ -0.62
CckbrP56481 Gm6082-201ENSMUST00000215204 454 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CckbrP56481 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.19□□□□□ -0.62
CckbrP56481 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CckbrP56481 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CckbrP56481 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.18□□□□□ -0.62
CckbrP56481 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CckbrP56481 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.18□□□□□ -0.62
CckbrP56481 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.18□□□□□ -0.62
CckbrP56481 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
CckbrP56481 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.18□□□□□ -0.62
CckbrP56481 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
CckbrP56481 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CckbrP56481 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
CckbrP56481 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CckbrP56481 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms