Protein–RNA interactions for Protein: P56389

Cda, Cytidine deaminase, mousemouse

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CdaP56389 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CdaP56389 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.8□□□□□ -0.68
CdaP56389 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CdaP56389 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.79□□□□□ -0.68
CdaP56389 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CdaP56389 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CdaP56389 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.79□□□□□ -0.68
CdaP56389 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.79□□□□□ -0.68
CdaP56389 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Rprl1-201ENSMUST00000158050 327 ntBASIC10.79□□□□□ -0.68
CdaP56389 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.79□□□□□ -0.68
CdaP56389 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.79□□□□□ -0.68
CdaP56389 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.79□□□□□ -0.68
CdaP56389 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gm42693-201ENSMUST00000196779 631 ntBASIC10.79□□□□□ -0.68
CdaP56389 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.79□□□□□ -0.68
CdaP56389 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.79□□□□□ -0.68
CdaP56389 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.79□□□□□ -0.68
CdaP56389 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.79□□□□□ -0.68
CdaP56389 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CdaP56389 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.78□□□□□ -0.68
CdaP56389 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.78□□□□□ -0.68
CdaP56389 Gm12036-201ENSMUST00000120008 530 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm14832-201ENSMUST00000121289 322 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.78□□□□□ -0.68
CdaP56389 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.78□□□□□ -0.68
CdaP56389 Gm24845-201ENSMUST00000158034 109 ntBASIC10.78□□□□□ -0.68
CdaP56389 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
CdaP56389 Gm18711-201ENSMUST00000199341 750 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm5950-201ENSMUST00000213337 772 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm19309-201ENSMUST00000218295 205 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CdaP56389 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.78□□□□□ -0.68
CdaP56389 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.78□□□□□ -0.68
CdaP56389 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CdaP56389 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CdaP56389 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CdaP56389 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
CdaP56389 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CdaP56389 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms