Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28833-201ENSMUST00000189671 559 ntBASIC12.66□□□□□ -0.38
NcanP55066 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Gm43163-201ENSMUST00000196571 442 ntBASIC12.66□□□□□ -0.38
NcanP55066 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.66□□□□□ -0.38
NcanP55066 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.66□□□□□ -0.38
NcanP55066 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.65□□□□□ -0.38
NcanP55066 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
NcanP55066 Gm13192-201ENSMUST00000101199 208 ntBASIC12.65□□□□□ -0.38
NcanP55066 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 Gm10443-201ENSMUST00000119024 210 ntBASIC12.65□□□□□ -0.38
NcanP55066 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.65□□□□□ -0.38
NcanP55066 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.65□□□□□ -0.38
NcanP55066 Gm20568-201ENSMUST00000197129 208 ntBASIC12.65□□□□□ -0.38
NcanP55066 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.65□□□□□ -0.38
NcanP55066 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.65□□□□□ -0.38
NcanP55066 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
NcanP55066 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NcanP55066 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NcanP55066 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
NcanP55066 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.64□□□□□ -0.39
NcanP55066 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.64□□□□□ -0.39
NcanP55066 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Gm12986-201ENSMUST00000119037 967 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NcanP55066 Gm25554-201ENSMUST00000158075 113 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm23400-201ENSMUST00000174994 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm26463-201ENSMUST00000175065 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm24332-201ENSMUST00000175102 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25959-201ENSMUST00000175112 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm22475-201ENSMUST00000175169 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm22903-201ENSMUST00000175193 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25070-201ENSMUST00000175237 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm24159-201ENSMUST00000175264 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25299-201ENSMUST00000175283 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm23798-201ENSMUST00000175560 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm23802-201ENSMUST00000175565 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25708-201ENSMUST00000177687 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm24370-201ENSMUST00000178007 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm23049-201ENSMUST00000178068 102 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm28019-201ENSMUST00000178138 101 ntBASIC12.64□□□□□ -0.39
NcanP55066 Gm25571-201ENSMUST00000178322 102 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms