Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fdft1P53798 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fdft1P53798 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.06□□□□□ -0.48
Fdft1P53798 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fdft1P53798 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm13786-201ENSMUST00000122371 333 ntBASIC12.06□□□□□ -0.48
Fdft1P53798 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.06□□□□□ -0.48
Fdft1P53798 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fdft1P53798 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fdft1P53798 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.06□□□□□ -0.48
Fdft1P53798 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fdft1P53798 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.06□□□□□ -0.48
Fdft1P53798 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm24830-201ENSMUST00000102024 166 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Gm15370-201ENSMUST00000117158 253 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Gm13392-201ENSMUST00000117708 150 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.05□□□□□ -0.48
Fdft1P53798 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm28882-201ENSMUST00000185504 314 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Morn2-202ENSMUST00000227729 656 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Gm26232-201ENSMUST00000083360 166 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Gm10478-201ENSMUST00000084451 396 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Fdft1P53798 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Fdft1P53798 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.05□□□□□ -0.48
Fdft1P53798 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Fdft1P53798 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Fdft1P53798 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Fdft1P53798 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms