Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.6□□□□□ -0.55
Sox3P53784 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.6□□□□□ -0.55
Sox3P53784 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sox3P53784 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sox3P53784 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.6□□□□□ -0.55
Sox3P53784 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox3P53784 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.59□□□□□ -0.55
Sox3P53784 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox3P53784 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.59□□□□□ -0.55
Sox3P53784 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Gm10312-201ENSMUST00000078515 489 ntBASIC11.59□□□□□ -0.55
Sox3P53784 Gm22058-201ENSMUST00000083393 310 ntBASIC11.59□□□□□ -0.55
Sox3P53784 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Sox3P53784 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.59□□□□□ -0.55
Sox3P53784 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox3P53784 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Sox3P53784 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox3P53784 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sox3P53784 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox3P53784 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Sox3P53784 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox3P53784 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.58□□□□□ -0.56
Sox3P53784 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.58□□□□□ -0.56
Sox3P53784 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox3P53784 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Gm12165-201ENSMUST00000117047 342 ntBASIC11.58□□□□□ -0.56
Sox3P53784 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox3P53784 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox3P53784 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Gm32999-201ENSMUST00000192693 562 ntBASIC11.58□□□□□ -0.56
Sox3P53784 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Sox3P53784 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox3P53784 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Sox3P53784 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox3P53784 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms