Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.28□□□□□ -0.6
Ptx3P48759 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ptx3P48759 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.28□□□□□ -0.6
Ptx3P48759 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ptx3P48759 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ptx3P48759 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Ptx3P48759 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Ptx3P48759 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ptx3P48759 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Ptx3P48759 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Rprl1-201ENSMUST00000158050 327 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Gm18038-201ENSMUST00000197900 485 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.27□□□□□ -0.61
Ptx3P48759 Gm44882-201ENSMUST00000205702 802 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.27□□□□□ -0.61
Ptx3P48759 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.27□□□□□ -0.61
Ptx3P48759 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ptx3P48759 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.27□□□□□ -0.61
Ptx3P48759 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ptx3P48759 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Ptx3P48759 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Gm15711-201ENSMUST00000118889 535 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.26□□□□□ -0.61
Ptx3P48759 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ptx3P48759 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ptx3P48759 Gm27552-201ENSMUST00000183351 62 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 Gm27844-201ENSMUST00000183613 62 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Ptx3P48759 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.26□□□□□ -0.61
Ptx3P48759 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.26□□□□□ -0.61
Ptx3P48759 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ptx3P48759 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ptx3P48759 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms