Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Sox2P48432 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.27□□□□□ -0.6
Sox2P48432 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox2P48432 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.27□□□□□ -0.61
Sox2P48432 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.27□□□□□ -0.61
Sox2P48432 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Gm27892-201ENSMUST00000185017 106 ntBASIC11.27□□□□□ -0.61
Sox2P48432 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Gm9136-201ENSMUST00000193368 454 ntBASIC11.27□□□□□ -0.61
Sox2P48432 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Gm45925-201ENSMUST00000218882 744 ntBASIC11.27□□□□□ -0.61
Sox2P48432 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sox2P48432 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Sox2P48432 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox2P48432 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.26□□□□□ -0.61
Sox2P48432 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.26□□□□□ -0.61
Sox2P48432 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.26□□□□□ -0.61
Sox2P48432 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox2P48432 Gm27486-201ENSMUST00000184923 80 ntBASIC11.26□□□□□ -0.61
Sox2P48432 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.26□□□□□ -0.61
Sox2P48432 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm10076-201ENSMUST00000073238 384 ntBASIC11.26□□□□□ -0.61
Sox2P48432 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Sox2P48432 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox2P48432 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.25□□□□□ -0.61
Sox2P48432 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox2P48432 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.25□□□□□ -0.61
Sox2P48432 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox2P48432 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox2P48432 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox2P48432 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox2P48432 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox2P48432 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Sox2P48432 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox2P48432 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.25□□□□□ -0.61
Sox2P48432 Gm13736-201ENSMUST00000119272 253 ntBASIC11.25□□□□□ -0.61
Sox2P48432 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sox2P48432 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Sox2P48432 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms