Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm8100-201ENSMUST00000182906 988 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm8566-201ENSMUST00000120174 465 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm5733-201ENSMUST00000190232 939 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm44124-201ENSMUST00000204159 472 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm6905-201ENSMUST00000205729 511 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm4607-201ENSMUST00000206649 577 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm45770-201ENSMUST00000212105 616 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm807-202ENSMUST00000224929 408 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.42□□□□□ -0.58
Nkx2-6P43688 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-6P43688 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms