Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox18P43680 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Gm11989-201ENSMUST00000117240 672 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gm13809-201ENSMUST00000117921 597 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gm11362-201ENSMUST00000118838 850 ntBASIC11.77□□□□□ -0.53
Sox18P43680 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gm11980-201ENSMUST00000121445 986 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 Gm22877-201ENSMUST00000175451 105 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sox18P43680 Gm23771-201ENSMUST00000178702 110 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gm44958-201ENSMUST00000203734 736 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.77□□□□□ -0.53
Sox18P43680 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.77□□□□□ -0.53
Sox18P43680 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Ermard-209ENSMUST00000226561 1019 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox18P43680 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox18P43680 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.77□□□□□ -0.53
Sox18P43680 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox18P43680 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.76□□□□□ -0.53
Sox18P43680 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm6461-201ENSMUST00000120015 633 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm13487-201ENSMUST00000122240 864 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox18P43680 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox18P43680 Gm37024-201ENSMUST00000192224 868 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.76□□□□□ -0.53
Sox18P43680 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm5298-201ENSMUST00000201122 892 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm44038-201ENSMUST00000203952 889 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.76□□□□□ -0.53
Sox18P43680 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox18P43680 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Gm807-202ENSMUST00000224929 408 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox18P43680 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox18P43680 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox18P43680 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox18P43680 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Sox18P43680 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.76□□□□□ -0.53
Sox18P43680 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox18P43680 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 1232.5 ms