Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gm26286-201ENSMUST00000104166 134 ntBASIC11.04□□□□□ -0.64
Nkx2-2P42586 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gm14441-201ENSMUST00000121960 540 ntBASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gm26361-201ENSMUST00000158868 186 ntBASIC11.04□□□□□ -0.64
Nkx2-2P42586 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.04□□□□□ -0.64
Nkx2-2P42586 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.03□□□□□ -0.64
Nkx2-2P42586 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.03□□□□□ -0.64
Nkx2-2P42586 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.03□□□□□ -0.64
Nkx2-2P42586 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkx2-2P42586 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-2P42586 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-2P42586 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkx2-2P42586 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.02□□□□□ -0.64
Nkx2-2P42586 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkx2-2P42586 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms