Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm8805-201ENSMUST00000117848 313 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm12203-201ENSMUST00000118235 598 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm12209-201ENSMUST00000120089 596 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm13123-201ENSMUST00000122173 492 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm12138-201ENSMUST00000122180 951 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm24644-201ENSMUST00000157114 139 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm23363-201ENSMUST00000175024 79 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm24196-201ENSMUST00000179161 110 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm29649-201ENSMUST00000185649 419 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC8.11□□□□□ -1.11
Rpl28P41105 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm8598-201ENSMUST00000221184 836 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Mir339-201ENSMUST00000083659 96 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rpl28P41105 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Rpl28P41105 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.11□□□□□ -1.11
Rpl28P41105 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rpl28P41105 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.11□□□□□ -1.11
Rpl28P41105 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Rpl28P41105 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm12384-201ENSMUST00000119228 919 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Gm13369-201ENSMUST00000119442 987 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Gm11803-201ENSMUST00000119966 444 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Gm22331-201ENSMUST00000158066 136 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm37497-201ENSMUST00000195830 798 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm7653-201ENSMUST00000214567 508 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC8.1□□□□□ -1.11
Rpl28P41105 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rpl28P41105 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 161.8 ms