Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.35□□□□□ -0.59
Sox6P40645 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox6P40645 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox6P40645 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm23931-201ENSMUST00000103842 109 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox6P40645 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox6P40645 Gm38002-201ENSMUST00000193255 180 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Gm38092-201ENSMUST00000195600 653 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Gm42627-201ENSMUST00000197347 224 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox6P40645 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox6P40645 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.34□□□□□ -0.59
Sox6P40645 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.34□□□□□ -0.59
Sox6P40645 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox6P40645 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox6P40645 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox6P40645 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sox6P40645 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox6P40645 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sox6P40645 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Sox6P40645 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Sox6P40645 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Sox6P40645 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Gm22018-201ENSMUST00000104357 131 ntBASIC11.33□□□□□ -0.6
Sox6P40645 Mir1247-201ENSMUST00000116706 82 ntBASIC11.33□□□□□ -0.6
Sox6P40645 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox6P40645 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox6P40645 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox6P40645 Gm24548-201ENSMUST00000158650 108 ntBASIC11.33□□□□□ -0.6
Sox6P40645 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Gm43133-201ENSMUST00000197472 463 ntBASIC11.33□□□□□ -0.6
Sox6P40645 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox6P40645 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.33□□□□□ -0.6
Sox6P40645 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox6P40645 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.33□□□□□ -0.6
Sox6P40645 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox6P40645 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox6P40645 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox6P40645 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms