Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.94□□□□□ -0.82
Timp3P39876 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Timp3P39876 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.94□□□□□ -0.82
Timp3P39876 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm6963-201ENSMUST00000147879 379 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Timp3P39876 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Timp3P39876 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.94□□□□□ -0.82
Timp3P39876 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Timp3P39876 Gm25700-201ENSMUST00000177693 110 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.94□□□□□ -0.82
Timp3P39876 Gm19187-201ENSMUST00000206781 892 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.94□□□□□ -0.82
Timp3P39876 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Nsd1-205ENSMUST00000224693 852 ntBASIC9.94□□□□□ -0.82
Timp3P39876 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.94□□□□□ -0.82
Timp3P39876 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Timp3P39876 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.93□□□□□ -0.82
Timp3P39876 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Timp3P39876 Gm7857-201ENSMUST00000117957 358 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.93□□□□□ -0.82
Timp3P39876 Gm24845-201ENSMUST00000158034 109 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.93□□□□□ -0.82
Timp3P39876 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm43138-201ENSMUST00000199123 708 ntBASIC9.93□□□□□ -0.82
Timp3P39876 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.93□□□□□ -0.82
Timp3P39876 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Timp3P39876 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.93□□□□□ -0.82
Timp3P39876 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Timp3P39876 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.93□□□□□ -0.82
Timp3P39876 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Timp3P39876 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Timp3P39876 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Timp3P39876 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Timp3P39876 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Timp3P39876 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms