Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fen1P39749 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fen1P39749 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fen1P39749 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fen1P39749 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.15□□□□□ -0.47
Fen1P39749 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.15□□□□□ -0.47
Fen1P39749 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Fen1P39749 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.14□□□□□ -0.47
Fen1P39749 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Fen1P39749 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.14□□□□□ -0.47
Fen1P39749 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Fen1P39749 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Fen1P39749 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Gm12742-201ENSMUST00000117326 410 ntBASIC12.14□□□□□ -0.47
Fen1P39749 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Mir1982-201ENSMUST00000157368 74 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.14□□□□□ -0.47
Fen1P39749 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.14□□□□□ -0.47
Fen1P39749 Gm38092-201ENSMUST00000195600 653 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Gm4768-201ENSMUST00000206199 686 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fen1P39749 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.14□□□□□ -0.47
Fen1P39749 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fen1P39749 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.14□□□□□ -0.47
Fen1P39749 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fen1P39749 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.13□□□□□ -0.47
Fen1P39749 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Fen1P39749 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Gm27243-201ENSMUST00000183964 521 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Gm4034-201ENSMUST00000187674 480 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.13□□□□□ -0.47
Fen1P39749 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.13□□□□□ -0.47
Fen1P39749 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.13□□□□□ -0.47
Fen1P39749 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Gm24136-201ENSMUST00000083374 165 ntBASIC12.13□□□□□ -0.47
Fen1P39749 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fen1P39749 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Fen1P39749 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fen1P39749 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fen1P39749 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms