Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Rfc1P35601 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rfc1P35601 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.71□□□□□ -0.37
Rfc1P35601 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfc1P35601 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.71□□□□□ -0.38
Rfc1P35601 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rfc1P35601 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfc1P35601 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rfc1P35601 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Gm14704-201ENSMUST00000120300 874 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Gm14760-201ENSMUST00000121831 999 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Gm12138-201ENSMUST00000122180 951 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.7□□□□□ -0.38
Rfc1P35601 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rfc1P35601 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rfc1P35601 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rfc1P35601 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rfc1P35601 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rfc1P35601 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.69□□□□□ -0.38
Rfc1P35601 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.69□□□□□ -0.38
Rfc1P35601 Gm11618-201ENSMUST00000117946 267 ntBASIC12.69□□□□□ -0.38
Rfc1P35601 Gm10156-201ENSMUST00000122364 462 ntBASIC12.69□□□□□ -0.38
Rfc1P35601 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.69□□□□□ -0.38
Rfc1P35601 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.69□□□□□ -0.38
Rfc1P35601 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfc1P35601 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfc1P35601 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms