Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VtnP29788 Gm25732-201ENSMUST00000175168 60 ntBASIC10.96□□□□□ -0.65
VtnP29788 Gm18711-201ENSMUST00000199341 750 ntBASIC10.96□□□□□ -0.65
VtnP29788 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.96□□□□□ -0.65
VtnP29788 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.96□□□□□ -0.65
VtnP29788 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
VtnP29788 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.96□□□□□ -0.65
VtnP29788 Nsd1-205ENSMUST00000224693 852 ntBASIC10.96□□□□□ -0.65
VtnP29788 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.96□□□□□ -0.65
VtnP29788 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.96□□□□□ -0.65
VtnP29788 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VtnP29788 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
VtnP29788 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
VtnP29788 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
VtnP29788 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
VtnP29788 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VtnP29788 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VtnP29788 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
VtnP29788 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VtnP29788 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.96□□□□□ -0.66
VtnP29788 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
VtnP29788 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
VtnP29788 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm11989-201ENSMUST00000117240 672 ntBASIC10.95□□□□□ -0.66
VtnP29788 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm11362-201ENSMUST00000118838 850 ntBASIC10.95□□□□□ -0.66
VtnP29788 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.95□□□□□ -0.66
VtnP29788 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.95□□□□□ -0.66
VtnP29788 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VtnP29788 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Gm7003-201ENSMUST00000195089 312 ntBASIC10.95□□□□□ -0.66
VtnP29788 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
VtnP29788 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm19187-201ENSMUST00000206781 892 ntBASIC10.95□□□□□ -0.66
VtnP29788 Gm45598-202ENSMUST00000210719 986 ntBASIC10.95□□□□□ -0.66
VtnP29788 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.95□□□□□ -0.66
VtnP29788 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.95□□□□□ -0.66
VtnP29788 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
VtnP29788 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.95□□□□□ -0.66
VtnP29788 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VtnP29788 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VtnP29788 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
VtnP29788 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VtnP29788 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.94□□□□□ -0.66
VtnP29788 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.94□□□□□ -0.66
VtnP29788 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.94□□□□□ -0.66
VtnP29788 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VtnP29788 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.94□□□□□ -0.66
VtnP29788 Gm23200-201ENSMUST00000104379 132 ntBASIC10.94□□□□□ -0.66
VtnP29788 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VtnP29788 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.94□□□□□ -0.66
VtnP29788 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.94□□□□□ -0.66
VtnP29788 Gm27390-201ENSMUST00000184516 176 ntBASIC10.94□□□□□ -0.66
VtnP29788 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.94□□□□□ -0.66
VtnP29788 Gm28450-201ENSMUST00000187349 638 ntBASIC10.94□□□□□ -0.66
VtnP29788 Rprl1-202ENSMUST00000198476 238 ntBASIC10.94□□□□□ -0.66
VtnP29788 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VtnP29788 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms