Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nckap1P28660 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nckap1P28660 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nckap1P28660 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.03□□□□□ -0.48
Nckap1P28660 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm23251-201ENSMUST00000103773 110 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nckap1P28660 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm7851-201ENSMUST00000117574 323 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm28686-201ENSMUST00000187404 609 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm37246-201ENSMUST00000192665 835 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm9555-201ENSMUST00000200908 583 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Nckap1P28660 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.03□□□□□ -0.48
Nckap1P28660 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.03□□□□□ -0.48
Nckap1P28660 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nckap1P28660 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nckap1P28660 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nckap1P28660 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nckap1P28660 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nckap1P28660 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nckap1P28660 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Nckap1P28660 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Gm14724-201ENSMUST00000118400 537 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Gm13045-201ENSMUST00000119019 712 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Gm15131-201ENSMUST00000119124 595 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.02□□□□□ -0.49
Nckap1P28660 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.02□□□□□ -0.49
Nckap1P28660 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Gm5733-201ENSMUST00000190232 939 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.02□□□□□ -0.49
Nckap1P28660 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Gm29787-201ENSMUST00000222129 849 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.02□□□□□ -0.49
Nckap1P28660 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.02□□□□□ -0.49
Nckap1P28660 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.02□□□□□ -0.49
Nckap1P28660 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.02□□□□□ -0.49
Nckap1P28660 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms