Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 Gm42657-201ENSMUST00000201746 211 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.52□□□□□ -0.25
Col2a1P28481 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.52□□□□□ -0.25
Col2a1P28481 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.52□□□□□ -0.25
Col2a1P28481 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Col2a1P28481 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.52□□□□□ -0.25
Col2a1P28481 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.52□□□□□ -0.25
Col2a1P28481 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col2a1P28481 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.51□□□□□ -0.25
Col2a1P28481 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Mir6998-201ENSMUST00000183343 64 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Gm38210-201ENSMUST00000191944 809 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Gm17877-201ENSMUST00000192578 814 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Gm34023-201ENSMUST00000195539 217 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.51□□□□□ -0.25
Col2a1P28481 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.51□□□□□ -0.25
Col2a1P28481 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col2a1P28481 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col2a1P28481 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.51□□□□□ -0.25
Col2a1P28481 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col2a1P28481 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col2a1P28481 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col2a1P28481 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col2a1P28481 Gm23153-201ENSMUST00000175323 313 ntBASIC13.5□□□□□ -0.25
Col2a1P28481 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Gm21778-201ENSMUST00000178779 471 ntBASIC13.5□□□□□ -0.25
Col2a1P28481 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.5□□□□□ -0.25
Col2a1P28481 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.5□□□□□ -0.25
Col2a1P28481 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Col2a1P28481 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Col2a1P28481 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.5□□□□□ -0.25
Col2a1P28481 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.5□□□□□ -0.25
Col2a1P28481 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col2a1P28481 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col2a1P28481 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms