Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm5523-201ENSMUST00000180415 997 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm11509-201ENSMUST00000117358 325 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm11511-201ENSMUST00000118146 540 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Mir1943-201ENSMUST00000158276 73 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm19353-201ENSMUST00000184561 445 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm3332-201ENSMUST00000189337 928 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm45118-201ENSMUST00000208928 825 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Gm4157-201ENSMUST00000211647 679 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.41□□□□□ -0.42
Nfkb1P25799 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nfkb1P25799 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.41□□□□□ -0.42
Nfkb1P25799 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Gm26286-201ENSMUST00000104166 134 ntBASIC12.4□□□□□ -0.42
Nfkb1P25799 Gm14247-201ENSMUST00000120950 237 ntBASIC12.4□□□□□ -0.42
Nfkb1P25799 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.4□□□□□ -0.42
Nfkb1P25799 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.4□□□□□ -0.42
Nfkb1P25799 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nfkb1P25799 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nfkb1P25799 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms