Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Mir1901-201ENSMUST00000122616 78 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm20392-201ENSMUST00000173047 701 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm10731-201ENSMUST00000181171 448 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm8768-201ENSMUST00000220020 826 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Map1b-203ENSMUST00000223725 2669 ntBASIC12.47□□□□□ -0.41
Hoxd8P23463 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxd8P23463 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxd8P23463 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Hoxd8P23463 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm11451-201ENSMUST00000118946 630 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm9358-201ENSMUST00000183067 927 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm28937-201ENSMUST00000185413 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm29400-201ENSMUST00000187208 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm29013-201ENSMUST00000187431 237 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm28662-201ENSMUST00000188446 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm28251-201ENSMUST00000188835 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm37318-201ENSMUST00000194325 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm38017-201ENSMUST00000194768 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm37287-201ENSMUST00000195449 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm37793-201ENSMUST00000195548 695 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxd8P23463 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxd8P23463 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.46□□□□□ -0.41
Hoxd8P23463 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxd8P23463 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxd8P23463 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms