Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Pde6bP23440 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pde6bP23440 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.22□□□□□ -0.29
Pde6bP23440 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.22□□□□□ -0.29
Pde6bP23440 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pde6bP23440 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Pde6bP23440 Gm13035-201ENSMUST00000117496 342 ntBASIC13.22□□□□□ -0.29
Pde6bP23440 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pde6bP23440 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pde6bP23440 Gm7467-201ENSMUST00000185173 652 ntBASIC13.22□□□□□ -0.29
Pde6bP23440 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.22□□□□□ -0.29
Pde6bP23440 Gm5369-201ENSMUST00000217499 588 ntBASIC13.22□□□□□ -0.29
Pde6bP23440 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.22□□□□□ -0.29
Pde6bP23440 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6bP23440 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pde6bP23440 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Gm12165-201ENSMUST00000117047 342 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Gm12501-201ENSMUST00000119163 529 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Gm25881-201ENSMUST00000157783 103 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.21□□□□□ -0.29
Pde6bP23440 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.21□□□□□ -0.29
Pde6bP23440 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.21□□□□□ -0.29
Pde6bP23440 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.21□□□□□ -0.29
Pde6bP23440 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pde6bP23440 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.21□□□□□ -0.3
Pde6bP23440 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pde6bP23440 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Pde6bP23440 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm11941-201ENSMUST00000119904 610 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm19353-201ENSMUST00000184561 445 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.2□□□□□ -0.3
Pde6bP23440 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Pde6bP23440 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pde6bP23440 Gm5455-201ENSMUST00000058710 715 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.2□□□□□ -0.3
Pde6bP23440 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms