Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm9192-201ENSMUST00000183221 985 ntBASIC11.54□□□□□ -0.56
Hoxb9P20615 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.54□□□□□ -0.56
Hoxb9P20615 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.54□□□□□ -0.56
Hoxb9P20615 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb9P20615 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxb9P20615 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.54□□□□□ -0.56
Hoxb9P20615 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.54□□□□□ -0.56
Hoxb9P20615 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Hoxb9P20615 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.54□□□□□ -0.56
Hoxb9P20615 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb9P20615 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm15276-201ENSMUST00000145953 498 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm17376-201ENSMUST00000166016 84 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm43962-201ENSMUST00000203898 190 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb9P20615 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.53□□□□□ -0.56
Hoxb9P20615 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb9P20615 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Hoxb9P20615 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb9P20615 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb9P20615 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.52□□□□□ -0.56
Hoxb9P20615 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hoxb9P20615 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.52□□□□□ -0.57
Hoxb9P20615 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Hoxb9P20615 Gm25700-201ENSMUST00000177693 110 ntBASIC11.52□□□□□ -0.57
Hoxb9P20615 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxb9P20615 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.52□□□□□ -0.57
Hoxb9P20615 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms