Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn1P18608 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11□□□□□ -0.65
Hmgn1P18608 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Gm8738-201ENSMUST00000172606 329 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11□□□□□ -0.65
Hmgn1P18608 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11□□□□□ -0.65
Hmgn1P18608 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Hmgn1P18608 Gm38241-201ENSMUST00000192641 898 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Gm42937-201ENSMUST00000197360 752 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11□□□□□ -0.65
Hmgn1P18608 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11□□□□□ -0.65
Hmgn1P18608 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hmgn1P18608 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11□□□□□ -0.65
Hmgn1P18608 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hmgn1P18608 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hmgn1P18608 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
Hmgn1P18608 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn1P18608 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm14928-201ENSMUST00000120198 477 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm14247-201ENSMUST00000120950 237 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm27682-201ENSMUST00000183930 110 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm29649-201ENSMUST00000185649 419 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.99□□□□□ -0.65
Hmgn1P18608 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Hmgn1P18608 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hmgn1P18608 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.99□□□□□ -0.65
Hmgn1P18608 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hmgn1P18608 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hmgn1P18608 BC043934-202ENSMUST00000185694 2356 ntBASIC10.98□□□□□ -0.65
Hmgn1P18608 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hmgn1P18608 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms