Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Mir1247-201ENSMUST00000116706 82 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.78□□□□□ -0.84
Cdx1P18111 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx1P18111 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.78□□□□□ -0.84
Cdx1P18111 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.78□□□□□ -0.84
Cdx1P18111 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Cdx1P18111 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cdx1P18111 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.77□□□□□ -0.84
Cdx1P18111 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.77□□□□□ -0.84
Cdx1P18111 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cdx1P18111 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Gm15198-201ENSMUST00000117283 177 ntBASIC9.77□□□□□ -0.85
Cdx1P18111 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Cdx1P18111 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.77□□□□□ -0.85
Cdx1P18111 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.77□□□□□ -0.85
Cdx1P18111 Gm27514-201ENSMUST00000183692 110 ntBASIC9.77□□□□□ -0.85
Cdx1P18111 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Itm2b-204ENSMUST00000228637 783 ntBASIC9.77□□□□□ -0.85
Cdx1P18111 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cdx1P18111 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cdx1P18111 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.77□□□□□ -0.85
Cdx1P18111 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cdx1P18111 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cdx1P18111 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms