Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Srp54P14576 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Srp54P14576 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Srp54P14576 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Srp54P14576 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Srp54P14576 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Srp54P14576 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Srp54P14576 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.9□□□□□ -0.5
Srp54P14576 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.9□□□□□ -0.5
Srp54P14576 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Gm18038-201ENSMUST00000197900 485 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.9□□□□□ -0.5
Srp54P14576 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Gm5455-201ENSMUST00000058710 715 ntBASIC11.9□□□□□ -0.5
Srp54P14576 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Srp54P14576 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Srp54P14576 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.9□□□□□ -0.5
Srp54P14576 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.9□□□□□ -0.5
Srp54P14576 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.9□□□□□ -0.5
Srp54P14576 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Srp54P14576 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.9□□□□□ -0.51
Srp54P14576 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srp54P14576 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Srp54P14576 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Srp54P14576 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.89□□□□□ -0.51
Srp54P14576 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54P14576 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.89□□□□□ -0.51
Srp54P14576 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm23912-201ENSMUST00000104687 87 ntBASIC11.89□□□□□ -0.51
Srp54P14576 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm18734-201ENSMUST00000172937 808 ntBASIC11.89□□□□□ -0.51
Srp54P14576 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.89□□□□□ -0.51
Srp54P14576 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm18711-201ENSMUST00000199341 750 ntBASIC11.89□□□□□ -0.51
Srp54P14576 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.89□□□□□ -0.51
Srp54P14576 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.89□□□□□ -0.51
Srp54P14576 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Srp54P14576 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Srp54P14576 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Srp54P14576 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Srp54P14576 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Srp54P14576 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms