Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.84□□□□□ -0.67
Ctla2aP12399 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ctla2aP12399 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ctla2aP12399 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.84□□□□□ -0.67
Ctla2aP12399 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ctla2aP12399 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Ctla2aP12399 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.67
Ctla2aP12399 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctla2aP12399 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctla2aP12399 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.83□□□□□ -0.68
Ctla2aP12399 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.83□□□□□ -0.68
Ctla2aP12399 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.83□□□□□ -0.68
Ctla2aP12399 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.83□□□□□ -0.68
Ctla2aP12399 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.83□□□□□ -0.68
Ctla2aP12399 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ctla2aP12399 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ctla2aP12399 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm14719-201ENSMUST00000121891 340 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm6983-201ENSMUST00000214912 628 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm19220-201ENSMUST00000222682 803 ntBASIC10.82□□□□□ -0.68
Ctla2aP12399 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ctla2aP12399 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ctla2aP12399 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms