Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UbbP0CG49 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Rgr-203ENSMUST00000225070 4704 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
UbbP0CG49 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Gm24830-201ENSMUST00000102024 166 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Gm23912-201ENSMUST00000104687 87 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
UbbP0CG49 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Gm14928-201ENSMUST00000120198 477 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm44405-201ENSMUST00000198952 126 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Gm18584-201ENSMUST00000203098 964 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm5781-201ENSMUST00000219792 443 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
UbbP0CG49 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm26232-201ENSMUST00000083360 166 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Gm22058-201ENSMUST00000083393 310 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
UbbP0CG49 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.49□□□□□ -0.73
UbbP0CG49 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
UbbP0CG49 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UbbP0CG49 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.49□□□□□ -0.73
UbbP0CG49 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UbbP0CG49 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UbbP0CG49 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UbbP0CG49 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms