Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 BC043934-202ENSMUST00000185694 2356 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.4□□□□□ -0.58
ApoeP08226 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
ApoeP08226 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ApoeP08226 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.4□□□□□ -0.58
ApoeP08226 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ApoeP08226 Gm44405-201ENSMUST00000198952 126 ntBASIC11.4□□□□□ -0.58
ApoeP08226 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.4□□□□□ -0.58
ApoeP08226 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.4□□□□□ -0.58
ApoeP08226 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.4□□□□□ -0.58
ApoeP08226 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Gm22058-201ENSMUST00000083393 310 ntBASIC11.4□□□□□ -0.58
ApoeP08226 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.4□□□□□ -0.58
ApoeP08226 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
ApoeP08226 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ApoeP08226 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
ApoeP08226 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ApoeP08226 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
ApoeP08226 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
ApoeP08226 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
ApoeP08226 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Gm22331-201ENSMUST00000158066 136 ntBASIC11.39□□□□□ -0.59
ApoeP08226 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.39□□□□□ -0.59
ApoeP08226 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
ApoeP08226 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ApoeP08226 Gm2423-201ENSMUST00000074863 733 ntBASIC11.39□□□□□ -0.59
ApoeP08226 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
ApoeP08226 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.39□□□□□ -0.59
ApoeP08226 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ApoeP08226 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.39□□□□□ -0.59
ApoeP08226 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.39□□□□□ -0.59
ApoeP08226 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ApoeP08226 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ApoeP08226 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms