Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TnfP06804 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
TnfP06804 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.77□□□□□ -0.36
TnfP06804 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.77□□□□□ -0.36
TnfP06804 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.77□□□□□ -0.36
TnfP06804 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.77□□□□□ -0.36
TnfP06804 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TnfP06804 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.77□□□□□ -0.36
TnfP06804 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TnfP06804 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Gm13408-201ENSMUST00000119822 798 ntBASIC12.77□□□□□ -0.37
TnfP06804 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.77□□□□□ -0.37
TnfP06804 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.77□□□□□ -0.37
TnfP06804 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Gm13935-201ENSMUST00000121859 798 ntBASIC12.77□□□□□ -0.37
TnfP06804 Gm10051-201ENSMUST00000145209 414 ntBASIC12.77□□□□□ -0.37
TnfP06804 Gm22334-201ENSMUST00000158070 133 ntBASIC12.77□□□□□ -0.37
TnfP06804 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TnfP06804 Gm45575-201ENSMUST00000210283 548 ntBASIC12.77□□□□□ -0.37
TnfP06804 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.77□□□□□ -0.37
TnfP06804 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.77□□□□□ -0.37
TnfP06804 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.77□□□□□ -0.37
TnfP06804 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TnfP06804 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.37
TnfP06804 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.77□□□□□ -0.37
TnfP06804 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TnfP06804 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TnfP06804 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TnfP06804 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.76□□□□□ -0.37
TnfP06804 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Gm13809-201ENSMUST00000117921 597 ntBASIC12.76□□□□□ -0.37
TnfP06804 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.76□□□□□ -0.37
TnfP06804 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Mir1943-201ENSMUST00000158276 73 ntBASIC12.76□□□□□ -0.37
TnfP06804 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.76□□□□□ -0.37
TnfP06804 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TnfP06804 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TnfP06804 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Ginm1-202ENSMUST00000065124 300 ntBASIC12.76□□□□□ -0.37
TnfP06804 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.76□□□□□ -0.37
TnfP06804 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
TnfP06804 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TnfP06804 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TnfP06804 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.76□□□□□ -0.37
TnfP06804 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.76□□□□□ -0.37
TnfP06804 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TnfP06804 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms