Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.77□□□□□ -0.69
P06344 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.77□□□□□ -0.69
P06344 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.77□□□□□ -0.69
P06344 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
P06344 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.77□□□□□ -0.69
P06344 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P06344 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P06344 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
P06344 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.76□□□□□ -0.69
P06344 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.76□□□□□ -0.69
P06344 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.76□□□□□ -0.69
P06344 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Mir7070-201ENSMUST00000183657 86 ntBASIC10.76□□□□□ -0.69
P06344 Mir6927-201ENSMUST00000184494 71 ntBASIC10.76□□□□□ -0.69
P06344 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Gm4034-201ENSMUST00000187674 480 ntBASIC10.76□□□□□ -0.69
P06344 Gm18827-201ENSMUST00000188341 790 ntBASIC10.76□□□□□ -0.69
P06344 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.76□□□□□ -0.69
P06344 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.76□□□□□ -0.69
P06344 Gm18730-201ENSMUST00000218038 343 ntBASIC10.76□□□□□ -0.69
P06344 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.76□□□□□ -0.69
P06344 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P06344 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
P06344 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
P06344 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
P06344 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P06344 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.75□□□□□ -0.69
P06344 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.75□□□□□ -0.69
P06344 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.75□□□□□ -0.69
P06344 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.75□□□□□ -0.69
P06344 Gm12217-201ENSMUST00000118858 696 ntBASIC10.75□□□□□ -0.69
P06344 Gm7722-201ENSMUST00000120646 741 ntBASIC10.75□□□□□ -0.69
P06344 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.75□□□□□ -0.69
P06344 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
P06344 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.75□□□□□ -0.69
P06344 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.75□□□□□ -0.69
P06344 Gm26461-201ENSMUST00000175064 290 ntBASIC10.75□□□□□ -0.69
P06344 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.75□□□□□ -0.69
P06344 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.75□□□□□ -0.69
P06344 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Gm19208-201ENSMUST00000213861 912 ntBASIC10.75□□□□□ -0.69
P06344 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.75□□□□□ -0.69
P06344 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.75□□□□□ -0.69
P06344 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
P06344 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.75□□□□□ -0.69
P06344 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
P06344 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P06344 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms