Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm24255-201ENSMUST00000104481 128 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm27046-201ENSMUST00000182160 463 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm18711-201ENSMUST00000199341 750 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Gzmn-202ENSMUST00000225535 989 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.24□□□□□ -0.45
PdgfrbP05622 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PdgfrbP05622 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
PdgfrbP05622 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PdgfrbP05622 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm14109-201ENSMUST00000118814 309 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm7722-201ENSMUST00000120646 741 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.23□□□□□ -0.45
PdgfrbP05622 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm5070-201ENSMUST00000177599 862 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm3961-201ENSMUST00000204425 994 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PdgfrbP05622 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PdgfrbP05622 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.23□□□□□ -0.45
PdgfrbP05622 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PdgfrbP05622 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PdgfrbP05622 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm14644-201ENSMUST00000116671 647 ntBASIC12.22□□□□□ -0.45
PdgfrbP05622 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm13333-201ENSMUST00000119424 781 ntBASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm14247-201ENSMUST00000120950 237 ntBASIC12.22□□□□□ -0.45
PdgfrbP05622 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.22□□□□□ -0.45
PdgfrbP05622 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PdgfrbP05622 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PdgfrbP05622 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.22□□□□□ -0.45
PdgfrbP05622 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms