Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm24255-201ENSMUST00000104481 128 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm38266-201ENSMUST00000194931 421 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm4607-201ENSMUST00000206649 577 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm5455-201ENSMUST00000058710 715 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm11511-201ENSMUST00000118146 540 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm9192-201ENSMUST00000183221 985 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm38341-201ENSMUST00000195357 515 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Rprl1-202ENSMUST00000198476 238 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.4□□□□□ -0.74
Igh-VJ558P01758 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Igh-VJ558P01758 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igh-VJ558P01758 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Igh-VJ558P01758 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Igh-VJ558P01758 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igh-VJ558P01758 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.39□□□□□ -0.75
Igh-VJ558P01758 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Gm22323-201ENSMUST00000103832 109 ntBASIC10.39□□□□□ -0.75
Igh-VJ558P01758 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms