Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm11450-201ENSMUST00000121144 333 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vti1aO89116 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.04□□□□□ -0.32
Vti1aO89116 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vti1aO89116 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.03□□□□□ -0.32
Vti1aO89116 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.03□□□□□ -0.32
Vti1aO89116 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.03□□□□□ -0.32
Vti1aO89116 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.03□□□□□ -0.32
Vti1aO89116 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.03□□□□□ -0.32
Vti1aO89116 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.03□□□□□ -0.32
Vti1aO89116 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.03□□□□□ -0.32
Vti1aO89116 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1aO89116 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vti1aO89116 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vti1aO89116 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.02□□□□□ -0.32
Vti1aO89116 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1aO89116 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm22133-201ENSMUST00000102082 109 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vti1aO89116 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vti1aO89116 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm9555-201ENSMUST00000200908 583 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm44958-201ENSMUST00000203734 736 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.02□□□□□ -0.33
Vti1aO89116 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.02□□□□□ -0.33
Vti1aO89116 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.02□□□□□ -0.33
Vti1aO89116 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.02□□□□□ -0.33
Vti1aO89116 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1aO89116 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Vti1aO89116 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vti1aO89116 Gm24934-201ENSMUST00000103764 111 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm15131-201ENSMUST00000119124 595 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm13408-201ENSMUST00000119822 798 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm13935-201ENSMUST00000121859 798 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm5616-201ENSMUST00000165252 384 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm8741-201ENSMUST00000174736 384 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Gm19459-201ENSMUST00000176240 835 ntBASIC13.01□□□□□ -0.33
Vti1aO89116 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms