Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Gm42693-201ENSMUST00000196779 631 ntBASIC12.42□□□□□ -0.42
CopeO89079 Gm43818-201ENSMUST00000200605 466 ntBASIC12.42□□□□□ -0.42
CopeO89079 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.42□□□□□ -0.42
CopeO89079 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.42□□□□□ -0.42
CopeO89079 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CopeO89079 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.42□□□□□ -0.42
CopeO89079 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CopeO89079 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.41□□□□□ -0.42
CopeO89079 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.41□□□□□ -0.42
CopeO89079 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.41□□□□□ -0.42
CopeO89079 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.41□□□□□ -0.42
CopeO89079 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
CopeO89079 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.41□□□□□ -0.42
CopeO89079 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.41□□□□□ -0.42
CopeO89079 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.41□□□□□ -0.42
CopeO89079 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Gm5035-201ENSMUST00000215581 927 ntBASIC12.41□□□□□ -0.42
CopeO89079 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.41□□□□□ -0.42
CopeO89079 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.41□□□□□ -0.42
CopeO89079 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.41□□□□□ -0.42
CopeO89079 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CopeO89079 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.41□□□□□ -0.42
CopeO89079 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CopeO89079 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
CopeO89079 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CopeO89079 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.4□□□□□ -0.42
CopeO89079 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CopeO89079 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Gm14999-201ENSMUST00000121039 624 ntBASIC12.4□□□□□ -0.42
CopeO89079 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.4□□□□□ -0.42
CopeO89079 Gm7809-201ENSMUST00000153199 742 ntBASIC12.4□□□□□ -0.42
CopeO89079 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Gm42937-201ENSMUST00000197360 752 ntBASIC12.4□□□□□ -0.42
CopeO89079 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.4□□□□□ -0.42
CopeO89079 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CopeO89079 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.4□□□□□ -0.42
CopeO89079 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CopeO89079 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopeO89079 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopeO89079 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CopeO89079 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CopeO89079 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms