Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Matn4O89029 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.35□□□□□ -0.59
Matn4O89029 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.35□□□□□ -0.59
Matn4O89029 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.35□□□□□ -0.59
Matn4O89029 Gm19994-201ENSMUST00000217086 586 ntBASIC11.35□□□□□ -0.59
Matn4O89029 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Matn4O89029 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Matn4O89029 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn4O89029 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Matn4O89029 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.35□□□□□ -0.59
Matn4O89029 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.35□□□□□ -0.59
Matn4O89029 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Matn4O89029 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn4O89029 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.34□□□□□ -0.59
Matn4O89029 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Matn4O89029 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Matn4O89029 Gm11478-201ENSMUST00000117851 599 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Gm12164-201ENSMUST00000121695 551 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.34□□□□□ -0.59
Matn4O89029 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.34□□□□□ -0.59
Matn4O89029 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Gm43002-201ENSMUST00000200310 155 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.34□□□□□ -0.59
Matn4O89029 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Gm9996-201ENSMUST00000070359 913 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Matn4O89029 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Matn4O89029 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Matn4O89029 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn4O89029 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Matn4O89029 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.34□□□□□ -0.59
Matn4O89029 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms