Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm5950-201ENSMUST00000213337 772 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.58□□□□□ -0.56
Hcn1O88704 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.58□□□□□ -0.56
Hcn1O88704 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm26035-201ENSMUST00000083065 308 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Hcn1O88704 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.58□□□□□ -0.56
Hcn1O88704 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.58□□□□□ -0.56
Hcn1O88704 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hcn1O88704 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Gm24255-201ENSMUST00000104481 128 ntBASIC11.57□□□□□ -0.56
Hcn1O88704 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.57□□□□□ -0.56
Hcn1O88704 Gm14381-201ENSMUST00000122105 414 ntBASIC11.57□□□□□ -0.56
Hcn1O88704 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.57□□□□□ -0.56
Hcn1O88704 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.57□□□□□ -0.56
Hcn1O88704 Gm37259-201ENSMUST00000193903 849 ntBASIC11.57□□□□□ -0.56
Hcn1O88704 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hcn1O88704 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hcn1O88704 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hcn1O88704 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hcn1O88704 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.56□□□□□ -0.56
Hcn1O88704 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.56□□□□□ -0.56
Hcn1O88704 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hcn1O88704 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Hcn1O88704 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm11597-201ENSMUST00000121423 964 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hcn1O88704 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.56□□□□□ -0.56
Hcn1O88704 Rmrp-201ENSMUST00000157463 271 ntBASIC11.56□□□□□ -0.56
Hcn1O88704 Gm25043-201ENSMUST00000158604 212 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms